Further investigation of a genetically divergent group of plum pox virus-M strain in Turkey

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dc.authoridTeber, Saffet/0000-0002-9987-3287
dc.authoridGurcan, Kahraman/0000-0002-2120-2563
dc.contributor.authorGurcan, Kahraman
dc.contributor.authorTeber, Saffet
dc.contributor.authorCaglayan, Kadriye
dc.date.accessioned2024-09-18T20:54:27Z
dc.date.available2024-09-18T20:54:27Z
dc.date.issued2019
dc.departmentHatay Mustafa Kemal Üniversitesien_US
dc.description.abstractIn the past several years, a limited number of isolates of a diverse group of Plum pox virus (PPV) strain -M were discovered in the European part of Istanbul, Turkey. In this study, stone fruit samples were collected from the European part of Istanbul and investigated by PCR typing and sequence analyses for determining prevalence and genetic diversity of this divergent PPV-M isolates. Out of the 230 sampled trees, 97 were determined to be infected with PPV. Strains of 88 isolates were identified and 67 of them (76%) were divergent PPV-M isolates, detected in apricot, peach and plum trees revealing that they could be evolutionarily successful divergent PPV-M isolates prevalent in Istanbul. The divergent Istanbul M isolates formed a monophyletic clade thereby named as PPV-MIs. Additionally, recombination analysis suggested that PPV-MIs isolates could be the donor of the PPV-M-type recombinant fragment of the PPV-Rec strain.en_US
dc.description.sponsorshipResearch Fund of Erciyes University [FBA-11-3569, FDK-2013-4253]en_US
dc.description.sponsorshipThis research was supported by the Research Fund of Erciyes University (project numbers FBA-11-3569 and FDK-2013-4253). We deeply appreciate and thank to Dr. Ahmed Hadidi, and Dr. James Delano for language editing, and proofreading.en_US
dc.identifier.doi10.1007/s42161-018-0187-7
dc.identifier.endpage391en_US
dc.identifier.issn1125-4653
dc.identifier.issn2239-7264
dc.identifier.issue2en_US
dc.identifier.scopus2-s2.0-85064003918en_US
dc.identifier.scopusqualityQ2en_US
dc.identifier.startpage385en_US
dc.identifier.urihttps://doi.org/10.1007/s42161-018-0187-7
dc.identifier.urihttps://hdl.handle.net/20.500.12483/11809
dc.identifier.volume101en_US
dc.identifier.wosWOS:000466028600020en_US
dc.identifier.wosqualityQ3en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherSpringeren_US
dc.relation.ispartofJournal of Plant Pathologyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectPPV-Marcusen_US
dc.subjectPPV-Men_US
dc.subjectGenetic diversityen_US
dc.subjectMutationsen_US
dc.subjectTurkish isolatesen_US
dc.titleFurther investigation of a genetically divergent group of plum pox virus-M strain in Turkeyen_US
dc.typeArticleen_US

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