Detection and characterization of diverse phytoplasmas in ornamental and cultivated pomegranate species in Turkey

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dc.contributor.authorCaglayan, Kadriye
dc.contributor.authorKocabag, Hamide Deniz
dc.contributor.authorGazel, Mona
dc.contributor.authorSipahiog, Hikmet Murat
dc.date.accessioned2024-09-18T20:55:33Z
dc.date.available2024-09-18T20:55:33Z
dc.date.issued2022
dc.departmentHatay Mustafa Kemal Üniversitesien_US
dc.description.abstractYellowing, leaf curling and shoot-dieback symptoms on pomegranates have been observed in Turkey in last decade, however, the association of phytoplasmas to symptoms in pomegranates has been not fully understood. In the present study, 130 cultivated and 65 ornamental pomegranate trees were sampled from three provinces (Hatay, Adana, Sanliurfa) from southern part of Turkey. Nested-PCR assay and restriction fragment length polymorphism analysis were employed to identify the phytoplasma strains detected in symptomatic and asymptomatic pomegranate trees. Among 195 tested samples, three ornamental and six cultivated pomegranates were found positive for phytoplasmas by Nested-PCR. Based on virtual RFLP analysis of 16S rDNA sequences, the strains detected in cultivated pomegranates were related to 'Candidatus Phytoplasma asteris' (16SrI-S), 'Ca. P. solani' (16SrXII-A) and 'Ca. P. mali' (16SrX-A) whereas in the ornamental pomegranates only to 'Ca. P. prunorum' (16SrX-B) was detected. The association of 'Ca. P. mali' and 'Ca. P. asteris' related strains on cultivated pomegranates and as well as 'Ca. P. prunorum' in ornamental pomegranates have been identified for the first time worldwide. The presence of distinct phytoplasmas in pomegranates could result a high diversity of phytoplasmas within single plant species.en_US
dc.description.sponsorshipHatay Mustafa Kemal University, Scienti fi c Research Project Unit [MKU-BAP 16558]en_US
dc.description.sponsorshipAcknowledgements This work was fi nancially supported by a Grant (MKU-BAP 16558) from the Hatay Mustafa Kemal University, Scienti fi c Research Project Unit.. The Authors are thankful to Prof. Dr. G.P. Rao for critical reading of the manuscript.en_US
dc.identifier.doi10.1016/j.pmpp.2022.101891
dc.identifier.issn0885-5765
dc.identifier.scopus2-s2.0-85136569946en_US
dc.identifier.scopusqualityQ2en_US
dc.identifier.urihttps://doi.org/10.1016/j.pmpp.2022.101891
dc.identifier.urihttps://hdl.handle.net/20.500.12483/11918
dc.identifier.volume121en_US
dc.identifier.wosWOS:000863051500004en_US
dc.identifier.wosqualityQ2en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherAcademic Press Ltd- Elsevier Science Ltden_US
dc.relation.ispartofPhysiological and Molecular Plant Pathologyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectPunica granatum L.en_US
dc.subjectCandidatus Phytoplasma spp. PCR/RFLPen_US
dc.subjectPhylogenetic analysesen_US
dc.titleDetection and characterization of diverse phytoplasmas in ornamental and cultivated pomegranate species in Turkeyen_US
dc.typeArticleen_US

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