Hexaploid wheat (Triticum aestivum) root miRNome analysis in response to salt stress

Basit Öğe Kaydı
dc.authoridILHAN, EMRE/0000-0002-8404-7900
dc.authoridEren, Abdil Hakan/0009-0000-0004-1732
dc.authoridPekmezci, Muhammed Yusuf/0000-0003-1040-0393
dc.authoridUNVER, Turgay/0000-0001-6760-443X
dc.authoridOKAY, Sezer/0000-0003-0355-6672
dc.contributor.authorEren, H.
dc.contributor.authorPekmezci, M. Y.
dc.contributor.authorOkay, S.
dc.contributor.authorTurktas, M.
dc.contributor.authorInal, B.
dc.contributor.authorIlhan, E.
dc.contributor.authorAtak, M.
dc.date.accessioned2024-09-18T20:32:50Z
dc.date.available2024-09-18T20:32:50Z
dc.date.issued2015
dc.departmentHatay Mustafa Kemal Üniversitesien_US
dc.description.abstractHexaploid bread wheat (Triticum aestivum) is one of the major crops grown and consumed all over the world. Elevated soil salinity causes reduction in crop yield and quality; therefore, several strategies were developed to improve salt-tolerant cultivars. MicroRNAs (miRNAs), small and non-coding RNAs, regulate gene expression at post-transcriptional level and play important roles in stress tolerance. Here, we used a broad-range miRNA-microarray analysis to investigate the root-miRNA profiles of two cultivars, Bezostaja (sensitive) and Seri-82 (tolerant). A total of 44 differentially regulated miRNAs were identified in the 8 x 15K array containing 11 862 plant miRNAs available in the database. Sixteen novel salt-responsive miRNAs were determined in wheat for the first time. The expression of three miRNAs (hvu-miR5049a, ppt-miR1074 and osa-miR444b.2) was up-regulated more than 260-fold in cv. Bezostaja upon salt stress. The target-gene analyses showed that several salt-stress-responsive miRNAs regulate mainly transcription factors such as bHLH135-like, AP2/ERBP, MADS-box and transporters. Gene ontology searches for 565 putative salt-stress-responsive miRNA target-genes revealed 623 processes in 10 different main topics such as metabolic process and response to stimuli. The genome-wide root miRNome study indicates salt-stress-responsive wheat miRNAs and the possible mechanisms behind the tolerance.en_US
dc.description.sponsorshipTUBITAK [113o546]en_US
dc.description.sponsorshipThe study was funded by TUBITAK with Grant No. 113o546.en_US
dc.identifier.doi10.1111/aab.12219
dc.identifier.endpage216en_US
dc.identifier.issn0003-4746
dc.identifier.issn1744-7348
dc.identifier.issue2en_US
dc.identifier.scopus2-s2.0-84938546819en_US
dc.identifier.scopusqualityQ1en_US
dc.identifier.startpage208en_US
dc.identifier.urihttps://doi.org/10.1111/aab.12219
dc.identifier.urihttps://hdl.handle.net/20.500.12483/11162
dc.identifier.volume167en_US
dc.identifier.wosWOS:000359062900005en_US
dc.identifier.wosqualityQ1en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherWileyen_US
dc.relation.ispartofAnnals of Applied Biologyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectMicroarrayen_US
dc.subjectmiRNAen_US
dc.subjectsalt stressen_US
dc.subjecttranscriptomeen_US
dc.subjectwheaten_US
dc.titleHexaploid wheat (Triticum aestivum) root miRNome analysis in response to salt stressen_US
dc.typeArticleen_US

Dosyalar

Orijinal paket
Listeleniyor 1 - 1 / 1
[ N/A ]
İsim:
Tam Metin / Full Text
Boyut:
655.97 KB
Biçim:
Adobe Portable Document Format
İndir

Koleksiyon

WoS İndeksli Yayınlar Koleksiyonu
Scopus İndeksli Yayınlar Koleksiyonu