Incidence, distribution and limited genetic variability among Turkish isolates of Grapevine Pinot gris virus from different grapevine cultivars

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dc.authoridRoumi, Vahid/0000-0002-6496-2298
dc.authoridElci, Eminur/0000-0002-6434-6321
dc.contributor.authorElci, Eminur
dc.contributor.authorGazel, Mona
dc.contributor.authorRoumi, Vahid
dc.contributor.authorCaglayan, Kadriye
dc.date.accessioned2024-09-18T21:00:36Z
dc.date.available2024-09-18T21:00:36Z
dc.date.issued2018
dc.departmentHatay Mustafa Kemal Üniversitesien_US
dc.description.abstractGrapevine Pinot gris virus (GPGV) was firstly identified in northern Italy by deep sequencing from grapevine cv. Pinot gris, exhibiting mottling and deformation of the leaves. The objective of this study was to investigate the prevalence and genetic variability of GPGV isolates obtained from different local and imported grapevine cultivars in Turkey based on partial coat protein, movement protein and RNA-dependent RNA polymerase (RdRp) domain of the replicase (Rep) gene. Two hundred and one grapevine samples from different provinces were tested by RT-PCR assays, approximately 25% of which were found to be infected by GPGV. The PCR products were sequenced and based on the phylogenetic analysis, RdRp gene was found to be most conserved region. The phylograms of three genomic regions revealed correlation between geography and genetic structure. Furthermore, nucleotide diversity studies revealed a low divergence from the homologous sequences from GenBank and some variations within the groups were detected. The results presented in this study provide a better understanding of genetic variation and phylogenetic of GPGV isolates worldwide.en_US
dc.identifier.doi10.1007/s41348-018-0175-3
dc.identifier.endpage476en_US
dc.identifier.issn1861-3829
dc.identifier.issn1861-3837
dc.identifier.issue5en_US
dc.identifier.scopus2-s2.0-85053698599en_US
dc.identifier.scopusqualityQ1en_US
dc.identifier.startpage469en_US
dc.identifier.urihttps://doi.org/10.1007/s41348-018-0175-3
dc.identifier.urihttps://hdl.handle.net/20.500.12483/12784
dc.identifier.volume125en_US
dc.identifier.wosWOS:000446097400004en_US
dc.identifier.wosqualityQ3en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherSpringer Heidelbergen_US
dc.relation.ispartofJournal of Plant Diseases and Protectionen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectVitis vinifera L.en_US
dc.subjectGPGVen_US
dc.subjectCPen_US
dc.subjectMPen_US
dc.subjectRepen_US
dc.subjectGenetic variationen_US
dc.titleIncidence, distribution and limited genetic variability among Turkish isolates of Grapevine Pinot gris virus from different grapevine cultivarsen_US
dc.typeArticleen_US

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