Further characterization of a new recombinant group of Plum pox virus isolates, PPV-T, found in orchards in the Ankara province of Turkey

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dc.authoridCandresse, Thierry/0000-0001-9757-1835
dc.authoridULUBAS SERCE, CIGDEM/0000-0001-5337-5883
dc.contributor.authorSerce, Cigdem Ulubas
dc.contributor.authorCandresse, Thierry
dc.contributor.authorSvanella-Dumas, Laurence
dc.contributor.authorKrizbai, Laszlo
dc.contributor.authorGazel, Mona
dc.contributor.authorCaglayan, Kadriye
dc.date.accessioned2024-09-18T20:54:18Z
dc.date.available2024-09-18T20:54:18Z
dc.date.issued2009
dc.departmentHatay Mustafa Kemal Üniversitesien_US
dc.description.abstractSixteen Plum pox virus (PPV) isolates collected in the Ankara region of Turkey were analyzed using available serological and molecular typing assays. Surprisingly, despite the fact that all isolates except one, which was a mix infection, were typed as belonging to the PPV-M strain in four independent molecular assays, nine of them (60%) reacted with both PPV-M specific and PPV-D specific monoclonal antibodies. Partial 5' and 3' genomic sequence analysis on four isolates demonstrated that irrespective of their reactivity towards the PPV-D specific monoclonal antibody, they were all closely related to a recombinant PPV isolate from Turkey, Ab-Tk. All three isolates for which the relevant genomic sequence was obtained showed the same recombination event as Ab-Tk in the HC-Pro gene, around position 1566 of the genome. Complete genomic sequencing of Ab-Tk did not provide evidence for additional recombination events in its evolutionary history. Taken together, these results indicate that a group of closely related PPV isolates characterized by a unique recombination in the HC-Pro gene is prevalent under field conditions in the Ankara region of Turkey. Similar to the situation with the PPV-Rec strain, we propose that these isolates represent a novel strain of PPV, for which the name PPV-T (Turkey) is proposed. Given that PPV-T isolates cannot be identified by currently available typing techniques, it is possible that their presence has been overlooked in other situations. Further efforts should allow a precise description of their prevalence and of their geographical distribution in Turkey and, possibly, in other countries. (C) 2009 Elsevier B.V. All rights reserved.en_US
dc.description.sponsorshipScientific and Technical Research Council of Turkey (TUBITAK) [TOGTAG-MACAR-2001/2]en_US
dc.description.sponsorshipThis study was partially supported by Scientific and Technical Research Council of Turkey (TUBITAK) (TOGTAG-MACAR-2001/2).en_US
dc.identifier.doi10.1016/j.virusres.2009.01.022
dc.identifier.endpage126en_US
dc.identifier.issn0168-1702
dc.identifier.issn1872-7492
dc.identifier.issue1-2en_US
dc.identifier.pmid19428744en_US
dc.identifier.scopus2-s2.0-67349246774en_US
dc.identifier.scopusqualityQ1en_US
dc.identifier.startpage121en_US
dc.identifier.urihttps://doi.org/10.1016/j.virusres.2009.01.022
dc.identifier.urihttps://hdl.handle.net/20.500.12483/11736
dc.identifier.volume142en_US
dc.identifier.wosWOS:000266366600015en_US
dc.identifier.wosqualityQ2en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.indekslendigikaynakPubMeden_US
dc.language.isoenen_US
dc.publisherElsevieren_US
dc.relation.ispartofVirus Researchen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectPlum pox virusen_US
dc.subjectApricoten_US
dc.subjectPlumen_US
dc.subjectStrainen_US
dc.subjectRecombinanten_US
dc.subjectTypingen_US
dc.titleFurther characterization of a new recombinant group of Plum pox virus isolates, PPV-T, found in orchards in the Ankara province of Turkeyen_US
dc.typeArticleen_US

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