Genetic diversity and population structure in caprifigs (Ficus carica var. caprificus) using SSR markers

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dc.authoridergul, ali/0000-0002-1205-268X
dc.authoridKaratas, Nesrin/0000-0002-1173-9594
dc.authoridcaliskan, oguzhan/0000-0002-2583-9588
dc.contributor.authorCaliskan, Oguzhan
dc.contributor.authorBayazit, Safder
dc.contributor.authorIlgin, Muruvvet
dc.contributor.authorKaratas, Nesrin
dc.contributor.authorErgul, Ali
dc.date.accessioned2024-09-18T20:25:20Z
dc.date.available2024-09-18T20:25:20Z
dc.date.issued2018
dc.departmentHatay Mustafa Kemal Üniversitesien_US
dc.description.abstractAbundant wild and cultivated fig germplasm can be found in Turkey, a center of diversity for figs; however, many of these valuable genetic resources have not yet been identified or characterized using molecular markers. In the present study, microsatellite markers were used to characterize a set of 96 caprifig (Ficus carica var. caprificus) accessions from Turkey. The caprifig accessions showed considerable polymorphism with an average of 8.3 alleles per locus. The number of alleles per locus varied from three for the loci LMFC18 and LMFC23, to 14 for the loci FCUPO38-6 and FCUP008. Genetic distance values and cluster analyses revealed high genetic similarities, except for the reference group, among the caprifig groups. Factorial correspondence analysis also separated the caprifig groups, suggesting that caprifig populations from Turkey were unmixed, probably because of low gene flow; likely because gamplasm has not yet been moved among geographical areas and because many caprifig populations arose from propagation by seed. In our population structure analysis, the caprifig accessions could be grouped according to the regions from where they were sampled. Our molecular data revealed great genetic diversity within this caprifig germplasm. This genetically rich caprifig germplasm resource will be useful for both fig breeding programs and analysis of the complex genetic structure of figs that reproduce using various pollination strategies.en_US
dc.description.sponsorshipScientific and Technical Research Council of Turkey [TUBITAK-114O034]en_US
dc.description.sponsorshipScientific and Technical Research Council of Turkey (TUBITAK-114O034).en_US
dc.identifier.doi10.5424/sjar/2018163-11662
dc.identifier.issn1695-971X
dc.identifier.issue3en_US
dc.identifier.scopus2-s2.0-85055516338en_US
dc.identifier.scopusqualityQ3en_US
dc.identifier.urihttps://doi.org/10.5424/sjar/2018163-11662
dc.identifier.urihttps://hdl.handle.net/20.500.12483/10243
dc.identifier.volume16en_US
dc.identifier.wosWOS:000448042200014en_US
dc.identifier.wosqualityQ2en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.language.isoenen_US
dc.publisherSpanish Natl Inst Agricultural & Food Research & Technoloen_US
dc.relation.ispartofSpanish Journal of Agricultural Researchen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectgenetic resourcesen_US
dc.subjectmicrosatellite markersen_US
dc.subjectgenetic differentiation analysisen_US
dc.titleGenetic diversity and population structure in caprifigs (Ficus carica var. caprificus) using SSR markersen_US
dc.typeArticleen_US

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